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| [[BioMicroCenter:SingleCell|Single Cell]] and [[BioMicroCenter:SpTx|Spatial]]</B></BIG> | | [[BioMicroCenter:SingleCell|Single Cell]] and [[BioMicroCenter:SpTx|Spatial]]</B></BIG> |
| * 10X CHROMIUM <BR> <small> (5'RNA, 3'RNA, ATAC, multiome) </small> | | * 10X CHROMIUM <BR> <small> (5'RNA, 3'RNA, ATAC, multiome) </small> |
| * 10X VISIUM <BR> <small> (Standard, High Density) </small> | | * MICROARRAY BASED <BR> <small> (10X Visium High Density, Illumina StrataMap) </small> |
| * ELEMENT AVITI24 (<i>in situ</i> prep/sequencing) | | * ELEMENT AVITI24 (<i>in situ</i> prep/sequencing) |
| |} | | |} |
Latest revision as of 19:04, 21 August 2026
Welcome to the MIT BioMicro Center!
The MIT BioMicro Center is an integrated genomics core facility that provides both expertise and equipment for systems biology. The core has significant resources in sample preparation, next generation sequencing and in high throughput screening as well as bioinformatics and BioIT. The Center is a joint endeavor between the Department of Biology, the Koch Institute for Integrative Cancer Research (Integrated Genome Technologies Core (IGT) and Data Science & Multimodal Integration Core (DSMI)), and the Department of Biological Engineering.
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Walk-up Instrumentation
- Includes: qPCR (LC480), Plate Readers (Varioskan/Synergy H1)
BioAnalyzer, NanoDrop, Covaris, Pippin Prep
Tecan/Chemagic automation
MiSeq i100, 10x Chromium X
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Single Cell and Spatial
- 10X CHROMIUM
(5'RNA, 3'RNA, ATAC, multiome)
- MICROARRAY BASED
(10X Visium High Density, Illumina StrataMap)
- ELEMENT AVITI24 (in situ prep/sequencing)
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Sequencing Technologies
- Short Read
- High Yield (>1b reads): Illumina NovaSeqX (25b,10b)†
- Mid Yield (250m-1b reads): Element AVITI24
- Low Yield (1m-150m reads): SingularG4, Illumina MiSeq i100
- Long Read (1kb+)
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| Automation / Library Prep
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| Education/Training/Seminars
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† - service will be performed in a sister core facility (Harvard, DFCI, or Broad)
BMC Internal wiki
