Jump to content

BioMicroCenter: Difference between revisions

From BioMicro Center
← Older edit

Slevine (talk | contribs)

2 user groups
154 edits
No edit summary
Tag: Manual revert
No edit summary
 
(2 intermediate revisions by 2 users not shown)
Line 15: Line 15:
* [[BioMicroCenter:People| Staff]]  
* [[BioMicroCenter:People| Staff]]  
* [[BioMicroCenter:Consulting| Getting Started]]
* [[BioMicroCenter:Consulting| Getting Started]]
* [[BioMicroCenter:PilotProjects| Pilot Grants]]
<!-- [[BioMicroCenter:Jobs|Positions Available]] -->
<!-- [[BioMicroCenter:Jobs|Positions Available]] -->
* [[BioMicroCenter:FAQ|FAQs]]
* [[BioMicroCenter:FAQ|FAQs]]
Line 50: Line 51:
  {|
  {|
   |width="10%" align="left"|<BIG><B>[[BioMicroCenter:Walkup Services|Walk-up Instrumentation]]</B></BIG>
   |width="10%" align="left"|<BIG><B>[[BioMicroCenter:Walkup Services|Walk-up Instrumentation]]</B></BIG>
<small>Includes: qPCR (LC480), Plate Readers (Varioskan/Synergy H1)<BR> BioAnalyzer, NanoDrop, Covaris, Pippin Prep<BR> Tecan/Chemagic automation<BR> MiSeq i100, 10x Chromium X</small>
* Includes: qPCR (LC480), Plate Readers (Varioskan/Synergy H1)<BR> BioAnalyzer, NanoDrop, Covaris, Pippin Prep<BR> Tecan/Chemagic automation<BR> MiSeq i100, 10x Chromium X
  |}
  |}


Line 59: Line 60:
[[BioMicroCenter:SingleCell|Single Cell]] and [[BioMicroCenter:SpTx|Spatial]]</B></BIG>
[[BioMicroCenter:SingleCell|Single Cell]] and [[BioMicroCenter:SpTx|Spatial]]</B></BIG>
* 10X CHROMIUM <BR> <small> (5'RNA, 3'RNA, ATAC, multiome) </small>
* 10X CHROMIUM <BR> <small> (5'RNA, 3'RNA, ATAC, multiome) </small>
* 10X VISIUM <BR> <small> (Standard, High Density) </small>
* MICROARRAY BASED <BR> <small> (10X Visium High Density, Illumina StrataMap) </small>
* ELEMENT AVITI24 (<i>in situ</i> prep/sequencing)
* ELEMENT AVITI24 (<i>in situ</i> prep/sequencing)
  |}
  |}

Latest revision as of 14:06, 6 November 2026

Welcome to the MIT BioMicro Center!

The MIT BioMicro Center is an integrated genomics core facility that provides both expertise and equipment for systems biology. The core has significant resources in sample preparation, next generation sequencing and in high throughput screening as well as bioinformatics and BioIT. The Center is a joint endeavor between the Department of Biology, the Koch Institute for Integrative Cancer Research (Integrated Genome Technologies Core (IGT) and Data Science & Multimodal Integration Core (DSMI)), and the Department of Biological Engineering.

Assisted Services
Walkup Services
Sample Isolation
Library Preparation
Walk-up Instrumentation
  • Includes: qPCR (LC480), Plate Readers (Varioskan/Synergy H1)
    BioAnalyzer, NanoDrop, Covaris, Pippin Prep
    Tecan/Chemagic automation
    MiSeq i100, 10x Chromium X

Single Cell and Spatial

  • 10X CHROMIUM
    (5'RNA, 3'RNA, ATAC, multiome)
  • MICROARRAY BASED
    (10X Visium High Density, Illumina StrataMap)
  • ELEMENT AVITI24 (in situ prep/sequencing)
Sequencing Technologies
  • Short Read
    • High Yield (>1b reads): Illumina NovaSeqX (25b,10b)†
    • Mid Yield (250m-1b reads): Element AVITI24
    • Low Yield (1m-150m reads): SingularG4, Illumina MiSeq i100
  • Long Read (1kb+)
Automation / Library Prep
Informatics Services
Data Analysis
BioIT/Research Computing
Education/Training/Seminars

† - service will be performed in a sister core facility (Harvard, DFCI, or Broad)


BMC Internal wiki

Retrieved from "http://bmcwiki.mit.edu/index.php?title=BioMicroCenter&oldid=131803"