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{| width="100%"  
{| width="100%"  
  |- valign="top"
  |- valign="top"
  |rowspan=3 width="33%"|
  |[[File:logo.png|left]]
{|
  | valign="top" align="left" height="145px"|
  |[[File:Bmclogo2020.png|400 px|center]]
  |}
|align="center" width="33%" style="background-color:transparent; border:1px solid purple; height:150px;"|
{|
  |valign="top" width="10%" align="left" height="145px"|
<BIG><B> The BioMicro Center </B></BIG>
<BIG><B> The BioMicro Center </B></BIG>
* [[BioMicroCenter:News|'''News & General Information''']]
* [[BioMicroCenter:News|'''News & General Information''']]
Line 19: Line 14:
* [[BioMicroCenter:Forms|User signup forms and Sample Submission Forms for external users]]  
* [[BioMicroCenter:Forms|User signup forms and Sample Submission Forms for external users]]  
* [[BioMicroCenter:Pricing|Pricing]]
* [[BioMicroCenter:Pricing|Pricing]]
* [[BioMicroCenter:Technology_Seminar_Series| Technology Seminar Series]]
* [[BioMicroCenter:FAQ|FAQs]]
* [[BioMicroCenter:FAQ|FAQs]]
[https://wikis.mit.edu/confluence/display/bmc ''BMC Internal wiki'']
 
|}
 
{| width="100%"
|- valign="top"
|colspan=2 align="center" style="background-color:yellow; border:1px solid purple"|
{|
  |<BIG><B>Assisted Services </B></BIG>
  |}
  |}
  |align="center" width="33%" style="background-color:transparent; border:1px solid purple; height:150px;"|
  |align="center" style="background-color:aqua; border:1px solid black"|
  {|
  {|
   |valign="top" width="10%" align="left" height="145px"|
   |<BIG><B> Walkup Services </B></BIG>
<BIG><B> [[BioMicroCenter:Sequencing|Sequencing Technologies]] </B></BIG>
* [[BioMicroCenter:Illumina_Sequencing|Illumina Sequencing]] (NovaSeq, NextSeq, MiSeq)
* [[BioMicroCenter:Singular Sequencing|Singular Sequencing]] (G4)
* [[BioMicroCenter:Element Sequencing|Element Sequencing]] (AVITI24)
* [[BioMicroCenter:PacBio| PacBio Sequencing]] with Revio
* [[BioMicroCenter:Oxford Nanopore Technologies| Nanopore Sequencing]] with PromethION
  |}
  |}
  |- valign="top"
  |-
  |align="center" width="33%" style="background-color:transparent; border:1px solid purple; height:150px;"|
  |align="center" style="background-color:transparent; border:1px solid black"|  
  {|
  {|
   |valign="top" width="10%" align="left" height="145px"|
   |valign="top" width="10%" align="left"|<BIG><B>Sample Isolation</B></BIG>
<BIG><B> High Throughput Equipment (Automation and Extraction)</B></BIG>
* [[BioMicroCenter:Tecan Freedom Evo|Liquid Handlers]] ([[BioMicroCenter:Tecan_Freedom_Evo#JOHNNY_5|Tecan EVO]] / [[BioMicroCenter:Tecan_Freedom_Evo#SPT_LABTECH_MOSQUITO_HV|SPT Mosquito]])
* DNA/RNA purification ([[BioMicroCenter:Tecan_Freedom_Evo#verrity_Chemagic_360|Chemagic360]])
* DNA/RNA purification ([[BioMicroCenter:Tecan_Freedom_Evo#verrity_Chemagic_360|Chemagic360]])
* Plate Readers ([[BioMicroCenter:Varioskan#Synergy_H1| Synergy H1]]/[[BioMicroCenter:Varioskan| Varioskan]])
* [[BioMicroCenter:Covaris|Covaris E220 and R230 Focused-ultrasonicators]]
  |}
  |}
  |align="center" width="33%" style="background-color:transparent; border:1px solid purple; height:150px;"|
  |align="center" style="background-color:transparent; border:1px solid black"|  
  {|
  {|
   |valign="top" width="10%" align="left" height="145px|
   |valign="top" width="10%" align="left"|<BIG><B>Library Preparation</B></BIG>
<BIG><B> Illumina Library Services </B></BIG>
* [[BioMicroCenter:Illumina_Library_Preparation|Short Read Sample Preparation]]
* [[BioMicroCenter:Illumina_Library_Preparation|Short Read Sample Preparation]]
** Standard Methods for [[BioMicroCenter:DNA_LIB| *DNA* ]] [[BioMicroCenter:RNA_LIB| *RNA* ]]
** Standard Methods for [[BioMicroCenter:DNA_LIB| *DNA* ]] [[BioMicroCenter:RNA_LIB| *RNA* ]]
** High Throughput Methods for [[BioMicroCenter:DNA_HTL| *DNA* ]]  [[BioMicroCenter:RNA_HTL| *RNA* ]]
** High Throughput Methods for [[BioMicroCenter:DNA_HTL| *DNA* ]]  [[BioMicroCenter:RNA_HTL| *RNA* ]]
|}
|align="center" style="background-color:transparent; border:1px solid black"|
{|
  |valign="top" width="10%" align="left"|<BIG><B>Sample Quantification</B></BIG>
* Plate Readers ([[BioMicroCenter:Varioskan#Synergy_H1| Synergy H1]]/[[BioMicroCenter:Varioskan| Varioskan]])
* [[BioMicroCenter:RTPCR| PCR and RT-PCR]]
* [[BioMicroCenter:QC|BioAnalyzer / AATI Fragment Analyzer / Femto Pulse]]
|}
|-
|align="center" style="background-color:transparent; border:1px solid black"|
{|
  |valign="top" width="10%" align="left"|<BIG><B>Single Cell and Spatial</B></BIG>
* [[BioMicroCenter:SingleCell|Single Cell Prep, Sequencing and Analysis]]
* [[BioMicroCenter:SingleCell|Single Cell Prep, Sequencing and Analysis]]
|}
|align="center" style="background-color:transparent; border:1px solid black"|
{|
  |valign="top" width="10%" align="left"|<BIG><B> [[BioMicroCenter:Sequencing|Sequencing Technologies]] </B></BIG>
* [[BioMicroCenter:Illumina_Sequencing|Illumina Sequencing]] (NovaSeq, NextSeq, MiSeq)
* [[BioMicroCenter:Singular Sequencing|Singular Sequencing]] (G4)
* [[BioMicroCenter:Element Sequencing|Element Sequencing]] (AVITI24)
* [[BioMicroCenter:PacBio| PacBio Sequencing]] with Revio
* [[BioMicroCenter:Oxford Nanopore Technologies| Nanopore Sequencing]] with PromethION
|}
|align="center" style="background-color:transparent; border:1px solid black"|
{|
  |valign="top" width="10%" align="left"|<BIG><B>Automation / Library Prep</B></BIG>
* [[BioMicroCenter:Tecan Freedom Evo|Liquid Handlers]] ([[BioMicroCenter:Tecan_Freedom_Evo#JOHNNY_5|Tecan EVO]]
* [[BioMicroCenter:Tecan_Freedom_Evo#SPT_LABTECH_MOSQUITO_HV|SPT Mosquito]])
* [[BioMicroCenter:Covaris|Covaris E220 and R230 Focused-ultrasonicators]]
* [[BioMicroCenter:PippinPrep|Pippin Prep automated electrophoresis system]]
* [[BioMicroCenter:PippinPrep|Pippin Prep automated electrophoresis system]]
 
* [[BioMicroCenter:Oligo_Synthesis| Oligo Synthesis]]
  |}
  |}
  |- valign="top"
  |-
  |align="center" width="33%" style="background-color:transparent; border:1px solid purple; height:150px;"|
  |align="center" style="background-color:transparent; border:1px solid black"|  
  {|
  {|
   |valign="top" width="10%" align="left" height="145px"|
   |valign="top" width="10%" align="left"|[[BioMicroCenter:Computing|<BIG><B>Data Analysis</B></BIG>]]
<BIG><B> [[BioMicroCenter:Computing|Bioinformatics and BioIT]] </B></BIG>
* [[BioMicroCenter:BioInformaticsStaff|Bioinformatic Consulting]]
* [[BioMicroCenter:BioInformaticsStaff|Bioinformatic Consulting]]
|}
|align="center" style="background-color:transparent; border:1px solid black"|
{|
  |valign="top" width="10%" align="left"|<BIG><B>Data Management/BioIT</B></BIG>
* [https://koch-institute-mit.gitbook.io/mit-data-management-analysis-core/ Data Management]
* [https://koch-institute-mit.gitbook.io/mit-data-management-analysis-core/ Data Management]
* [[BioMicroCenter:Computing#HARDWARE|Servers]]
* [[BioMicroCenter:Computing#HARDWARE|Servers]]
* [[BioMicroCenter:Computing#SOFTWARE|Software]]
* [[BioMicroCenter:Computing#SOFTWARE|Software]]
|}
|align="center" style="background-color:transparent; border:1px solid black"|
{|
  |valign="top" width="10%" align="left"|<BIG><B>Education/Training/Seminars</B></BIG>
* [[BioMicroCenter:BioinfoClasses|Informatics Training Sessions]]
* [[BioMicroCenter:BioinfoClasses|Informatics Training Sessions]]
* [[BioMicroCenter:BIG_meeting|BIG meeting Schedule]]
* [[BioMicroCenter:Technology_Seminar_Series| Technology Seminar Series]]
* [https://mit-ki.ilabsolutions.com/sc/3189/bioinformatics-and-computing-core?tab=services Poster Printing [[Image:Ki small.jpg]]]
|}
|align="center" width="33%" style="background-color:transparent; border:1px solid purple; height:150px;"|
{|
  |valign="top" width="10%" align="left" height="145px"|
<BIG><B> Other Services </B></BIG>
* [[BioMicroCenter:RTPCR| PCR and RT-PCR]]
* [[BioMicroCenter:QC|BioAnalyzer / AATI Fragment Analyzer / Femto Pulse]]
* [http://mailman.mit.edu:/mailman/listinfo/biostuff Biostuff mailing list]
* [http://mailman.mit.edu:/mailman/listinfo/biostuff Biostuff mailing list]
* [[BioMicroCenter:Oligo_Synthesis| Oligo Synthesis]]
  |}
  |}
|}
|}
<h2 align="center">  </h2>
<h2 align="center"> [http://whereis.mit.edu 68-322] ---- biomicro@mit.edu ---- 617-715-4533  </h2>


[https://wikis.mit.edu/confluence/display/bmc ''BMC Internal wiki'']


[[Image:Ki_small.jpg]] - Denotes services available through the KI Genomics Core in the High Throughput Facility located in 76-047 or in the KI Bioinformatics and Computing Core in 76-189 and are not directly part of the BioMicro Center.<BR>
<h2 align="center"> [http://whereis.mit.edu 68-322] ---- biomicro@mit.edu ---- 617-715-4533  </h2>

Revision as of 04:04, 15 May 2025

NOTE: This is an archival version of the wiki and may not be up to date. We are working to address this issue.

Welcome to the MIT BioMicro Center!

The MIT BioMicro Center is an integrated genomics core facility that provides both expertise and equipment for systems biology. The core has significant resources in sample preparation, next generation sequencing and in high throughput screening as well as bioinformatics and BioIT. The Center is a joint endeavor between the Department of Biology, the Koch Institute for Integrative Cancer Research (Integrated Genomics and Bioinformatics Core (IGB)), and the Department of Biological Engineering.

The BioMicro Center

Assisted Services
Walkup Services
Sample Isolation
Library Preparation


Sample Quantification
Single Cell and Spatial
Sequencing Technologies
Automation / Library Prep
Data Analysis
Data Management/BioIT
Education/Training/Seminars

BMC Internal wiki

68-322 ---- biomicro@mit.edu ---- 617-715-4533

Retrieved from "http://bmcwiki.mit.edu/index.php?title=BioMicroCenter&oldid=438"