http://bmcwiki.mit.edu/index.php?action=history&feed=atom&title=BioMicroCenter%3ADataManagementBioMicroCenter:DataManagement - Revision history2026-05-15T05:30:27ZRevision history for this page on the wikiMediaWiki 1.43.1http://bmcwiki.mit.edu/index.php?title=BioMicroCenter:DataManagement&diff=47&oldid=previmported>Cdemurjian: /* More Information */2024-07-01T18:36:03Z<p><span class="autocomment">More Information</span></p>
<p><b>New page</b></p><div>{{BioMicroCenter}}<br />
== Data Management ==<br />
<br />
The data managers at the BioMicro center are responsible for the organization and storage of scientific data. We do this using [https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/35836998/ NExtSEEK, a FAIR-compliant data management system], allowing for the data to be findable, accessible, interoperable, and reusable, ensuring the quality of the metadata being stored. NextSEEK is one of the only FAIR-compliant storage systems and is built to handle a variety of types of scientific data types, a contrast to other commercial databases that are built for one specific data type. <br />
<br />
Currently, we are working on five different projects comprising of numerous different labs; <br />
<br />
*[https://superfund.mit.edu/ The MIT SuperFund Research Program (SRP)]<br />
*[https://news.mit.edu/2021/modeling-mechanisms-metastasis-1105 Metastasis Network (MetNet)]<br />
*[https://www.niaid.nih.gov/research/immune-mechanisms-protection-mycobacterium-tuberculosis IMPAcTB]<br />
*[https://breakthroughcancer.org/ Break Through Cancer (BTC)]<br />
*[https://www.cancer.gov/about-nci/organization/dcb/research-programs/csbc Cancer Systems Biology Consortium (CSBC)]<br />
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The data managers at the BioMicro Center work with researchers to submit data in real time, making the data deposition and submission for publication process as simple as possible.<br />
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Published data is linked and available on FAIRDOMHub, at the links below:<br />
*[https://fairdomhub.org/projects/222 IMPAcTB]<br />
*[https://fairdomhub.org/projects/221 SRP]<br />
*[https://fairdomhub.org/projects/340 MetNet]<br />
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== More Information ==<br />
<br />
<br />
To learn more about what we do and how we implement FAIR compliance, go [[BioMicro:FAIR|here]].<br />
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For those interested in learning more about NExtSEEK and FAIRDOMHub, navigate to [[BioMicro:NextSEEK|this page]].<br />
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For instructions on how to use NExtSEEK, go to [https://nextseek.mit.edu/instructions Instructions] and [https://nextseek.mit.edu/tutorial Tutorial].<br />
<br />
[[File:Srp.png|200px]]<br />
[[File:Impact.png|200px]]<br />
[[File:Metnet.png|200px]]<br />
[[File:BTC.jpg|200px]]<br />
[[File:CSBC.jpg|200px]]<br />
<br />
<div style="display: flex;"><br />
<div style="margin-right: 20px;"><br />
{| class="wikitable"<br />
|+<br />
|-<br />
! Project !! Count<br />
|-<br />
| IMPAcTB || 57,622<br />
|-<br />
| MetNet || 3,450 <br />
|-<br />
| SRP || 32,281<br />
|-<br />
| BTC || 772<br />
|-<br />
| CSBC || 240<br />
|}<br />
</div><br />
<div><br />
{| class="wikitable"<br />
|+<br />
|-<br />
! Statistic !! Count<br />
|-<br />
| Samples || 97,082<br />
|-<br />
| Raw Data Files || 22,528<br />
|-<br />
| Analyzed Data Files || 1,126<br />
|-<br />
| FAIRDOMHub Studies || 29<br />
|-<br />
| Public FDH Studies || 18<br />
|}<br />
</div><br />
</div><br />
<br />
[[File:Data_table_240701.jpg]]</div>imported>Cdemurjian