View source for BioMicroCenter

<h2 align="center"> Welcome to the MIT BioMicro Center! </h2>

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* [[BioMicroCenter:News|'''News & General Information''']]
* [[BioMicroCenter:Pricing|Pricing]]
* Internal Sample Submission for <BR>[https://mit-ki.ilabsolutions.com/sc/3381/ki-genomics-core-mit-biomicro-center?tab=about Genomics] and [https://mit-ki.ilabsolutions.com/sc/3189/bioinformatics-and-computing-core/?tab=services Informatics] (ilabs)
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* [[BioMicroCenter:People| Staff]] 
<!-- [[BioMicroCenter:Jobs|Positions Available]] -->
* [[BioMicroCenter:Forms#NEW_USERS|New User Signup Forms]]
* [[BioMicroCenter:Forms|External Submission Forms]]
* [[BioMicroCenter:FAQ|FAQs]]
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The '''MIT BioMicro Center''' is an integrated genomics core facility that provides both expertise and equipment for systems biology. The core has significant resources in sample preparation, next generation sequencing and in high throughput screening as well as bioinformatics and BioIT. The Center is a joint endeavor between the [http://biology.mit.edu Department of Biology], the [http://ki.mit.edu Koch Institute for Integrative Cancer Research] (Integrated Genomics and Bioinformatics Core (IGB)), and the [http://web.mit.edu/be Department of Biological Engineering].

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  |<BIG><B>Assisted Services </B></BIG>
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  |<BIG><B> Walkup Services </B></BIG>
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  |width="10%" align="left"|<BIG><B>Sample Isolation</B></BIG>
* Sonication ([[BioMicroCenter:Covaris|Covaris E220/R230]])
* DNA/RNA purification ([[BioMicroCenter:Tecan_Freedom_Evo#Revvity_Chemagic_360|Chemagic360]])
* Quality Control<BR>([[BioMicroCenter:QC|AATI Fragment Analyzer/FemtoPulse]])
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  |width="10%" align="left"|<BIG><B>Library Preparation</B></BIG>
* [[BioMicroCenter:Illumina_Library_Preparation|Short Read Sample Preparation]]<small>
** Standard Methods for [[BioMicroCenter:DNA_LIB| *DNA* ]] [[BioMicroCenter:RNA_LIB| *RNA* ]]
** [[BioMicroCenter:FAQ#STANDARD_versus_HIGH_THROUGHPUT_LIBRARY_PREPARATION|High Throughput Methods]] for [[BioMicroCenter:DNA_HTL| *DNA* ]]  [[BioMicroCenter:RNA_HTL| *RNA* ]]</small>
* Long Read Sample Preparation<BR>([[BioMicroCenter:NanoPore_Library_Prep|Nanopore]] and [[BioMicroCenter:PacBio_Library_Preparation|PacBio]])
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  |width="10%" align="left"|<BIG><B>Sample Quantification</B></BIG>
* Plate Readers ([[BioMicroCenter:Varioskan#Synergy_H1| Synergy H1]]/[[BioMicroCenter:Varioskan| Varioskan]])
* [[BioMicroCenter:RTPCR|RT-PCR (Roche LC480)]]
* [[BioMicroCenter:QC| BioAnalyzer2100]]
* [[BioMicroCenter:QC#NanoDrop_ND-1000| NanoDrop ND-1000]]
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  |width="10%" align="left"|<BIG><B> 
[[BioMicroCenter:SingleCell|Single Cell]] and [[BioMicroCenter:SpTx|Spatial]]</B></BIG>
* 10X CHROMIUM <BR> <small> (5'RNA, 3'RNA, ATAC, multiome) </small>
* 10X VISIUM <BR> <small> (Standard, High Density) </small>
* ELEMENT AVITI24 (<i>in situ</i> prep/sequencing)
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  |width="10%" align="left"|<BIG><B> [[BioMicroCenter:Sequencing|Sequencing Technologies]] </B></BIG>
* High Yield (>1b reads) <small>
**[[BioMicroCenter:Illumina_Sequencing|Illumina NovaSeqX (25b,10b)]]†</small>
* Mid Yield (250m-1b reads) <small>
**[[BioMicroCenter:Element Sequencing|Element AVITI24]] </small>
* Low Yield (1m-150m reads) <small>
**[[BioMicroCenter:Singular Sequencing|SingularG4]]
**[[BioMicroCenter:Illumina_Sequencing|Illumina MiSeq i100]]</small>
* Long Read (1kb+) <small>
**[[BioMicroCenter:Oxford Nanopore Technologies|ONT PromethION]] 
**[[BioMicroCenter:PacBio|PacBio Revio]]†</small>
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  |width="10%" align="left"|<BIG><B>Automation / Library Prep</B></BIG>
* [[BioMicroCenter:Tecan Freedom Evo|Liquid Handlers]] ([[BioMicroCenter:Tecan_Freedom_Evo#JOHNNY_5|Tecan EVO]]
* [[BioMicroCenter:Tecan_Freedom_Evo#SPT_LABTECH_MOSQUITO_HV|SPT Mosquito]])
* [[BioMicroCenter:Covaris|Covaris E220 and R230 Focused-ultrasonicators]]
* [[BioMicroCenter:PippinPrep|Pippin Prep automated electrophoresis system]]
* [[BioMicroCenter:Oligo_Synthesis| Oligo Synthesis]]
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  |<BIG><B>Informatics Services</B></BIG>
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  |width="10%" align="left"|<BIG><B>Data Analysis</B></BIG>
* [https://igb.mit.edu/ Bioinformatic Consulting]
* [[BioMicroCenter:People#INFORMATICS_LAB|Informatics Staff]]
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  |width="10%" align="left"|<BIG><B>BioIT/Research Computing</B></BIG>
* [https://koch-institute-mit.gitbook.io/mit-data-management-analysis-core/ FAIR Data Management]
* [https://igb.mit.edu/computing-resources/active-data-storage Data Storage]
* [https://igb.mit.edu/computing-resources/luria-cluster Computing on Luria]
* [https://igb.mit.edu/data-management/globus Data Transfer (Globus)]
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  |width="10%" align="left"|<BIG><B>Education/Training/Seminars</B></BIG>
* [https://igb.mit.edu/mini-courses Informatics/Computing Training Sessions]
* [[BioMicroCenter:Technology_Seminar_Series|Technology Seminar Series]]
* [http://mailman.mit.edu:/mailman/listinfo/biostuff Biostuff mailing list]
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† - service will be performed in a sister core facility (Harvard, DFCI, or Broad)<BR>
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[https://wikis.mit.edu/confluence/display/bmc ''BMC Internal wiki'']

<h2 align="center"> CONTACT US </h2>
[http://whereis.mit.edu 68-322]<BR>
biomicro@mit.edu<BR>
617-715-4533