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==Previous teaching== {| border=1 !width 150px align="center"|DATE !width 150px align="center"|TIME !width 150px align="center"|Instructor !width 150px align="center"|Location !width 150px align="center"|Room !width 150px align="center"|Topic |-align="center" |Mon May 11, 2015 |2pm-3pm |Duanduan Ma |Building 76 |76-156a&b |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Jun 15, 2015 |1:30pm-3pm |Duanduan Ma |Building 68 |68-374 |Follow Up Course of Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Jul 13, 2015 |10am-11am |Charlie Whittaker |Building 76 |76-156a&b |Introduction to Spotfire |-align="center" |Mon Aug 10, 2015 |1:30pm-3pm |Duanduan Ma |Building 56 |56-602 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Sep 14, 2015 |1pm-4pm |Duanduan Ma |Building 68 |68-374 |Introduction to Python |-align="center" |Mon Oct 19, 2015 |1pm-4pm |Duanduan Ma |Building 68 |68-674 |Introduction to Python |-align="center" |Mon Nov 9, 2015 |1:30pm-3:30pm |Jie Wu and Vincent Butty |Building 68 |68-181 |A Traveller's companion to RNA-Seq interpretation QC slides[http://rowley.mit.edu/dropbox/RNA_Seq_Training/RNA-Seq_training_QC20151109.pdf] methods slides [http://rowley.mit.edu/dropbox/RNA_Seq_Training/RNASeq_110915_bis.pdf] |-align="center" |Mon Dec 14, 2015 |2pm-4pm |Duanduan Ma |Building 68 |68-474 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Thur Jan 7, 2016 |1:30pm-4:30pm |Duanduan Ma |Building 32 |32-124 |Quantitative Biology Workshop Outreach-Introduction to Python |-align="center" |Fri Jan 29, 2016 |9:00am-11:00am |Charlie Whittaker and Duanduan Ma |Building 14N (DIRC) |14N-132 |Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases |-align="center" |Tue Feb 16, 2016 |2:00am-3:00am |Sara Strandberg-Qlucore |Building 76 |76-156B |Introduction to Qlucore software |-align="center" |Mon Mar 7, 2016 |2pm-4pm |Duanduan Ma |Building 56 |56-602 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon April 11, 2016 |1pm-4pm |Duanduan Ma |Building 68 |68-121 |Introduction to R |-align="center" |Mon May 2, 2016 |1pm-4pm |Duanduan Ma |Building 68 |68-374 |Introduction to R |-align="center" |Mon May 9, 2016 |1pm-3pm |Qlucore |Building 14N(DIRC) |14N-132 |Hands on training of Qlucore software |-align="center" |Mon June 6, 2016 |2pm-4pm |Duanduan Ma |Building 68 |68-374 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Jun 13, 2016 |1pm-4pm |Duanduan Ma |Building 76 |76-156A/B |Introduction to R |-align="center" |Mon July 11, 2016 |1pm-4pm |Duanduan Ma |Building 56 |56-602 |Introduction to R |-align="center" |Mon Aug 8, 2016 |1pm-4pm |Duanduan Ma |Building 68 |68-374 |Introduction to R |-align="center" |Mon Sep 12, 2016 |2pm-4pm |Duanduan Ma |Building 76 |76-459 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Tue Oct 18, 2016 |1pm-3pm |Duanduan Ma |Building 68 |68-274 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Nov 7, 2016 |1:00pm-2:00pm |Jie Wu & Vincent Butty |Building 68 |68-181 |A Traveler's companion to RNA-Seq interpretation session 1 [http://rowley.mit.edu/dropbox/RNA_Seq_Training/2016-RNASeqTrainingSession1.pdf] |-align="center" |Mon Nov 14, 2016 |1:00pm-2:00pm |Jie Wu & Vincent Butty |Building 68 |68-181 |A Traveler's companion to RNA-Seq interpretation session 2 [http://rowley.mit.edu/dropbox/RNA_Seq_Training/2016-RNASeqTrainingSession2.pdf] |-align="center" |Mon Dec 12, 2016 |2pm-4pm |Duanduan Ma |Building 76 |76-259 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Thurs Jan 19, 2017 |1pm-3pm |Duanduan Ma |Building 68 |68-274 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Fri Feb 3, 2017 |12:00pm-2:00pm |Charlie Whittaker and Duanduan Ma |Building 14N (DIRC) |14N-132 |Visualizing and Accessing Genomic Data Using Publically Available Genome Browsers and Databases |-align="center" |Mon Mar 13, 2017 |2pm-4pm |Duanduan Ma |Building 68 |68-374 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon April 24, 2017 |1pm-4pm |Duanduan Ma |Building 68 |68-574 |Introduction to Python |-align="center" |Mon May 1, 2017 |1pm-4pm |Duanduan Ma |Building 68 |68-374 |Introduction to Python |-align="center" |Mon June 5, 2017 |1pm-4pm |Duanduan Ma |Building 68 |68-121 |Introduction to Python |-align="center" |Mon July 10, 2017 |1pm-4pm |Duanduan Ma |Building 76 |76-559 |Introduction to Python |-align="center" |Mon Aug 28, 2017 |2pm-4pm |Duanduan Ma |Building 68 |68-374 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Sep 25, 2017 |2:00pm-3:00pm |Vincent Butty |Building 68 |68-181 |RNA-Seq Experimental design + QC ; Slides [https://www.dropbox.com/s/p0mj0jubnuf6tm1/2017-RNASeqTrainingSession1.pdf?dl=0] |-align="center" |Mon Oct 2, 2017 |1:00pm-2:00pm |Vincent Butty |Building 68 |68-181 |RNA-Seq analysis ; Slides [https://www.dropbox.com/s/wojp2n5gy72vzn1/RNASeq_Tranining_pt2_100217.pdf?dl=0] |-align="center" |Mon Nov 13, 2017 |2pm-4pm |Duanduan Ma |Building 76 |76-259 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Dec 11, 2017 |1pm-4pm |Duanduan Ma |Building 56 |56-602 |Introduction to R |-align="center" |Wed Jan 31, 2018 |10am-12pm |Charlie Whittaker |Building 14N (DIRC) |14N-132 |Gene Set Enrichment Analysis |-align="center" |Mon Feb 12, 2018 |1pm-4pm |Duanduan Ma |Building 76 |76-459 |Introduction to R |-align="center" |Mon Mar 12, 2018 |2pm-4pm |Duanduan Ma |Building 56 |56-602 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon Apr 23, 2018 |1:30pm-2:30pm |Duanduan Ma |Building 68 |68-181 |Introduction to Biopython |-align="center" |Mon May 14, 2018 |2:30pm-3:30pm |Duanduan Ma |Building 76 |76-259 |Introduction to Biopython |-align="center" |Mon June 11, 2018 |2:00pm-4:00pm |Duanduan Ma |Building 56 |56-602 |Introduction to UNIX and the KI/BioMicro computational resourceso Biopython |-align="center" |Mon July 16, 2018 |2:30pm-4:00pm |Duanduan Ma |Building 68 |68-121 |Introduction of Python to biologists session 1 |-align="center" |Mon August 13, 2018 |2:30pm-4:00pm |Duanduan Ma |Building 76 |76-559 |Introduction of Python to biologists session 2 |-align="center" |Mon September 10, 2018 |2:00pm-4:00pm |Duanduan Ma |Building 56 |56-602 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Tue October 23, 2018 |1:30pm-2:30pm |Vincent Butty |Building 68 |68-181 |A Traveler's companion to RNA-Seq interpretation session 1 - Slides [https://www.dropbox.com/s/0l8qzsl2eur8357/2018-RNASeqTrainingSession1.pdf?dl=0] |-align="center" |Mon November 5, 2018 |1pm-2pm |Vincent Butty |Building 68 |68-181 |A Traveler's companion to RNA-Seq interpretation session 2 - Slides [https://www.dropbox.com/s/o229bslzkoprf0a/RNASeq_Tranining_pt2_110518.pdf?dl=0] |-align="center" |Mon December 10, 2018 |2:00pm-4:00pm |Duanduan Ma |Building 76 |76-259 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Thursday Jan 31, 2019 |10am-12pm |Charlie Whittaker |Building 14N (DIRC) |14N-132 |Gene Set Enrichment Analysis |-align="center" |Mon February 11, 2019 |2:30pm-4:00pm |Duanduan Ma |Building 68 |68-674 |Introduction of Python to biologists session 1 |-align="center" |Mon March 11, 2019 |2:30pm-4:30pm |Duanduan Ma |Building 76 |76-259 |Introduction of Python to biologists session 2 |-align="center" |Mon April 8, 2019 |2:00pm-4:00pm |Duanduan Ma |Building 68 |68-180 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon May 13, 2019 |2pm-4pm |Duanduan Ma |Building 68 |68-121 |Introduction to R session 1 |-align="center" |Mon June 10, 2019 |2pm-4pm |Duanduan Ma |Building 76 |76-659 |Introduction to R session 2 |-align="center" |Mon July 8, 2019 |2:00pm-4:00pm |Duanduan Ma |Building 68 |68-574 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Tue August 27, 2019 |2:30pm-3:30pm |Jingzhi Zhu & Duanduan Ma |Building 76 |76-659 |How to install software packages yourself on computing clusters |-align="center" |Wed September 25, 2019 |1:00pm-2:00pm |Vincent Butty |Building 68 |68-181 |A Traveler's companion to RNA-Seq interpretation session 1 - Slides [https://www.dropbox.com/s/0swr3trx0tq6ylf/2019-RNASeqTrainingSession1_092519.pdf?dl=0] |-align="center" |Wed October 2, 2019 |1:00pm-2:00pm |Vincent Butty |Building 68 |68-181 |A Traveler's companion to RNA-Seq interpretation session 2 - Slides [https://www.dropbox.com/s/43a3wgeur3gvmjg/RNASeq_Tranining_pt2_100219_prePPT.pdf?dl=0] |-align="center" |Mon November 18, 2019 |2:00pm-4:00pm |Duanduan Ma |Building 76 |76-659 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Tues December 10, 2019 |1:00pm-2:00pm |BMC/IGB core (Vincent Butty) |Building 68 |68-181 |Single Cell RNA-Seq Slides: [https://www.dropbox.com/s/ow5g18egngupipu/scRNASeq_December10.pdf?dl=0] |-align="center" |Mon January 31, 2020 |2:00pm-3:30pm |Duanduan Ma |Building 76 |76-659 |Introduction of machine learning and its applications in biology |-align="center" |Mon February 10, 2020 |2:00pm-4:30pm |Duanduan Ma |Building 76 |76-659 |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon March 9, 2020 |2:30pm-4:00pm |Duanduan Ma |Building 76 |76-659 |Introduction of Python to biologists session 1 |-align="center" |Mon April 17, 2020 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Fri May 8, 2020 |1:00pm-3:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 1 |-align="center" |Wed May 13, 2020 |1:00pm-3:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 2 |-align="center" |Fri May 27, 2020 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of Python to biologists session 2 |-align="center" |Fri June 5, 2020 |2:00pm-4:00pm |Duanduan Ma |Zoom |Zoom link |Introduction of Python to biologists session 1 |-align="center" |Mon June 8, 2020 |2:00pm-4:00pm |Duanduan Ma |Zoom |Zoom link |Introduction of Python to biologists session 2 |-align="center" |Mon June 15, 2020 |2:00pm-4:00pm |Duanduan Ma |Zoom |Zoom link |Introduction to Biopython |-align="center" |Mon July 20, 2020 |2:00pm-4:00pm |Duanduan Ma |Zoom |Zoom link |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon September 14, 2020 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of machine learning and its applications in biology session I |-align="center" |Mon September 21, 2020 |2:00pm-4:30pm |Duanduan Ma and Huiming Ding |Zoom |Zoom link |Introduction of machine learning and its applications in biology session II |-align="center" |Mon October 19, 2020 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Mon October 26, 2020 |2:00pm-4:30pm |Jingzhi Zhu |Zoom |Zoom link |How to install software packages yourself on computing clusters |-align="center" |Mon November 9, 2020 |2:00pm-4:30pm |Dikshant Pradhan |Zoom |Zoom link |Public Data Repositories |-align="center" |Wed December 9, 2020 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 1 |-align="center" |Wed December 16, 2020 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 2 |-align="center" |Tuesday February 16, 2021 |2pm-4:30pm |Duanduan Ma |zoom |zoom link |Introduction to UNIX and the KI/BioMicro computational resources session I |-align="center" |Monday February 22, 2021 |2pm-4:30pm |Jingzhi Zhu, Duanduan Ma |zoom |zoom link |Introduction to UNIX and the KI/BioMicro computational resources session II |-align="center" |Monday March 15, 2021 |2pm-4:30pm |Duanduan Ma |zoom |zoom link |Introduction of Python to biologists session I |-align="center" |Monday March 22, 2021 |2pm-4:30pm |Duanduan Ma |zoom |zoom link |Introduction of Python to biologists session II |-align="center" |Monday March 29, 2021 |2pm-4:30pm |Duanduan Ma |zoom |zoom link |Introduction to Biopython |-align="center" |Monday April 12, 2021 |2pm-3pm |Vincent Butty |zoom |zoom link |A Traveler's companion to RNA-Seq interpretation session I |-align="center" |Monday April 26, 2021 |2pm-3pm |Vincent Butty |zoom |zoom link |A Traveler's companion to RNA-Seq interpretation session II |-align="center" |Monday May 3, 2021 |2pm-3pm |Vincent Butty |zoom |zoom link |Single Cell RNA-seq |-align="center" |Monday May 10, 2021 |2pm-4:30pm |Duanduan Ma |zoom |zoom link |Introduction to UNIX and the KI/BioMicro computational resources session I |-align="center" |Monday May 17, 2021 |2pm-4:30pm |Jingzhi Zhu, Duanduan Ma |zoom |zoom link |Introduction to UNIX and the KI/BioMicro computational resources session II |-align="center" |Monday June 7, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 1 |-align="center" |Monday June 14, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 2 |-align="center" |Monday September 13, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to UNIX and the KI/BioMicro computational resources |-align="center" |Monday September 20, 2021 |2:00pm-4:30pm |Jingzhi Zhu |Zoom |Zoom link |Effective utilization of IGB computational resources - SLURM & CONDA |-align="center" |Monday October 11, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Python session I |-align="center" |Monday October 18, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Python session II |-align="center" |Monday October 25, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Biopython |-align="center" |Monday November 1, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Data processing and visualization using Python: Introduction to Pandas |-align="center" |Monday November 8, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Data processing and visualization using Python: Introduction to Matplotlib |-align="center" |Monday November 15, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Data processing and visualization using Python: Introduction to Seaborn |-align="center" |Monday December 13, 2021 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Linux and the IGB computational resources |-align="center" |Tuesday February 8, 2022 |2:00pm-4:30pm |Duanduan Ma and Jingzhi Zhu |Zoom |Zoom link |Introduction to Linux and the KI/BioMicro computational resources |-align="center" |Thursday March 3rd, 2022 |2:00pm-3:00pm |Dikshant Pradhan |Zoom |Zoom link |Public Data Repositories |-align="center" |Monday March 14th, 2022 |1:00pm-3:30pm |Vincent Butty |Zoom |Zoom link |RNA-Seq Design and Analysis Session I |-align="center" |Tuesday March 15th, 2022 |1:00pm-3:30pm |Vincent Butty |Zoom |Zoom link |RNA-Seq Design and Analysis Session II |-align="center" |Thursday March 17th, 2022 |1:00pm-3:30pm |Vincent Butty |Zoom |Zoom link |RNA-Seq Design and Analysis Session III |-align="center" |Monday March 28, 2022 |1:00pm-3:30pm |Duanduan Ma and Jingzhi Zhu |Zoom |Zoom link |Introduction to Linux and the KI/BioMicro computational resources |-align="center" |Monday April 11, 2022 |1:00pm-3:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 1 |-align="center" |Wednesday April 13, 2022 |1:00pm-3:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 2 |-align="center" |Monday Apil 25th, 2022 |1:00pm-3:30pm |Charlie Whittaker Dikshant Pradhan |Zoom |Zoom link |RNAseq HandsOn session 1 |-align="center" |Wednesday Apil 27th, 2022 |1:00pm-3:30pm |Charlie Whittaker Dikshant Pradhan |Zoom |Zoom link |RNAseq HandsOn session 2 |-align="center" |Friday Apil 27th, 2022 |1:00pm-3:30pm |Charlie Whittaker Dikshant Pradhan |Zoom |Zoom link |RNAseq HandsOn session 3 |-align="center" |Monday September 19th, 2022 |2:00pm-4:30pm |Duanduan Ma Jingzhi Zhu |Zoom |Zoom link |Introduction to Linux and Cluster Computing |-align="center" |Monday October 3rd, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of Python to biologists session I |-align="center" |Tuesday October 4th, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of Python to biologists session II |-align="center" |Friday October 7th, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Biopython |-align="center" |Monday October 31st, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Data processing and visualization using Python: Introduction to Matplotlib |-align="center" |Wednesday November 2nd, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Data processing and visualization using Python: Introduction to Pandas |-align="center" |Friday November 4th, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Data processing and visualization using Python: Introduction to Seaborn |-align="center" |Monday November 14th, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of machine learning and its applications in biology. session I |-align="center" |Wednesday November 16th, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of machine learning and its applications in biology. session II |-align="center" |Monday December 5th, 2022 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Linux and Cluster Computing |-align="center" |Monday February 6th, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Linux and Cluster Computing |-align="center" |Tuesday February 21, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 1 |-align="center" |Wednesday February 22, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to R session 2 |-align="center" |Mon March 13, 2023 |2:00pm-3:30pm |Stuart Levine |Zoom |Zoom link |Advanced Excel/Google Sheets for Biologists & Administrators |-align="center" |Monday April 3rd, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of Python to biologists session I |-align="center" |Wednesday April 5th, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction of Python to biologists session II |-align="center" |Monday April 10th, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Version control with Git session I |-align="center" |Wednesday April 12th, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Version control with Git session II |-align="center" |Monday April 24th, 2023 |1:00pm-3:30pm |Vincent Butty |Zoom |Zoom link |Bulk RNA-Seq Design and Analysis Session I |-align="center" |Wednesday April 26th, 2023 |1:00pm-3:30pm |Vincent Butty |Zoom |Zoom link |Bulk RNA-Seq Design and Analysis Session II |-align="center" |Thursday April 27th, 2023 |1:00pm-3:30pm |Vincent Butty |Zoom |Zoom link |Single cell RNA-Seq Design and Analysis Session I |-align="center" |Friday April 28th, 2023 |1:00pm-3:30pm |Vincent Butty |Zoom |Zoom link |Single cell RNA-Seq Design and Analysis Session II |-align="center" |Monday May 1st, 2023 |2:00pm-4:30pm |Duanduan Ma |Zoom |Zoom link |Introduction to Linux and Cluster Computing |-align="center" |Monday May 15th, 2023 |1:00pm-3:00pm |Charlie Whittaker |Zoom |Zoom link |RNAseq HandsOn session 1 |-align="center" |Wednesday May 17th, 2023 |1:00pm-3:00pm |Charlie Whittaker |Zoom |Zoom link |RNAseq HandsOn session 2 |-align="center" |Thursday May 18th, 2023 |1:00pm-3:00pm |Charlie Whittaker |Zoom |Zoom link |RNAseq HandsOn session 3 |}
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