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BioMicroCenter:DNA HTL
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== FRAGMENTED DNA == === NEB Ultra II === {| |- style="vertical-align: top;" | style="width:500px;" | {| class="wikitable" border=1 |- ! style="text-align: center; width: 150px;" | Parameter ! style="text-align: center; width: 300px;" | General requirements ! style="text-align: center; width: 300px;" | [[BioMicroCenter:DNA_HTL#DNA_Pre-load_Submissions|Pre-load requirements]] |- | style="text-align: center; height: 2em;" | SAMPLE INPUT | colspan="2" style="text-align: center; height: 2em;" | Fragmented DNA (i.e. ChIP-Seq, small PCR amplicons) |- | style="text-align: center; height: 2em;" | RANGE OF INPUT | style="text-align: center; height: 2em;" | 100pg - 75ng | style="text-align: center; height: 2em;" | Samples all [[BioMicroCenter:DNA_HTL#Normalization|normalized]] to same concentration in 10µL (100pg/µL - 7.5ng/µL) |- | style="text-align: center; height: 2em;" | SUBMISSION VOLUME | style="text-align: center; height: 2em;" | >10µL 10 mM Tris pH 8.0 | style="text-align: center; height: 2em;" | Exactly 10µL 10mM Tris pH 8.0 |- | style="text-align: center; height: 2em;" | UNIT | colspan="2" style="text-align: center; height: 2em;" | 24 samples <BR> 96 samples |- | style="text-align: center; height: 2em;" | PLATE SETUP | style="text-align: center; height: 2em;" | Samples should be arrayed by column in a 96-well full-skirt plate (Axygen) | style="text-align: center; height: 2em;" | Samples arrayed by column in [[BioMicroCenter:DNA_HTL#Quadrant_Layout|1st quadrant]] of 384-well hard-shell plate (BioRad) |- | style="text-align: center; height: 2em;" | SEQUENCING RECOMMENDATIONS | colspan="2" style="text-align: center; height: 2em;" | All platforms |- | style="text-align: center; height: 2em;" | INDEX AVAILABILITY | colspan="2" style="text-align: center; height: 2em;" |112 [[BioMicroCenter:DNA_HTL#Unique_versus_Combinatorial_Dual_Indexing|Unique Dual Indexes]] <br> 192 [[BioMicroCenter:DNA_HTL#Unique_versus_Combinatorial_Dual_Indexing|Combinatorial Dual Indexes]] |- | style="text-align: center; height: 2em;" | INCLUDED | colspan="2" style="text-align: center; height: 2em;" | Library preparation <BR> Spot check of final libraries |- | style="text-align: center; height: 2em;" | ADDITIONAL SERVICES AVAILABLE | style="text-align: center; height: 2em;" | Sample QC <BR> Sample cleaning <BR> Sample arraying <BR> Sample re-prep | style="text-align: center; height: 2em;" | [[BioMicroCenter:DNA_HTL#DNA_Pre-load_Submissions|N/A]] |- | style="text-align: center; height: 2em;" | SUBMISSION FORM | colspan="2" style="text-align: center; height: 2em;" | MIT - [https://mit.ilabsolutions.com/service_item/new/3381?spt_id=3863 ilabs] <BR> External - [[BioMicroCenter:Forms|form]] |- | style="text-align: center; height: 2em;" | PRICING | colspan="2" style="text-align: center; height: 2em;" | [[BioMicroCenter:Pricing#ILLUMINA_LIBRARY_-_DNA|LINK]] |} | <br> :NEBNext Ultra II is used for standard ligation-mediated PCR based approaches. We have miniaturized the reaction volume to a 1/5th scale that reliably performs on inputs ranging from 10pg to 75ng (recommended minimum of 100pg). The reaction begins with 10µL of normalized sample to which reagents are added. As such, initial submission of clean samples that have been pre-normalized in greater than 10µL of appropriate buffer will hasten sample processing. <br><br> :[[IMAGE:Ultra_II_DNA_Input.jpg | 400px]] [[IMAGE:Ultra_II_FAtrace.jpg | 400px]] | |}
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